GL1X · GenesisL1 explorer

Ligand · YSL

YSL · (1R,3R)-5-[(2E)-2-[(1R,3aS,7aR)-1-[(2R,3S)-3-(2-hydroxyethyl)nonan-2-yl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-2-methylidene-cyclohexane-1,3-diol

YSL, (1R,3R)-5-[(2E)-2-[(1R,3aS,7aR)-1-[(2R,3S)-3-(2-hydroxyethyl)nonan-2-yl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-2-methylidene-cyclohexane-1,3-diol (C30 H50 O3, 458.7 g/mol), in the MolNFT structures on…

Component
YSL
Formula
C30 H50 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

YSL in 2 structures; the first of them:

  • 5AWJ · Crystal structure of VDR-LBD/partial agonist complex: 22S-hexyl analogue · YSL A501 · binds TYR143, TYR147, PHE150, LEU226, LEU229, VAL230, SER233, ILE264 and 15 more
  • 5AWJ · Crystal structure of vdr-LBD/PARTIAL agonist complex: 22S-hexyl analogue · YSL A501 · binds TYR143, TYR147, PHE150, LEU226, LEU229, VAL230, SER233, ILE264 and 15 more

Residues it binds most

LEU 2, SER 2, TYR 2, HIS 2, ILE 2, PHE 2, VAL 2, ARG 2, CYS 2, MET 2 (residue and the binding sites it lines).

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