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Ligand · YSD

YSD · (1R,3R,7E,17beta)-17-[(2R)-5-ethyl-5-hydroxyheptan-2-yl]-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol

YSD, (1R,3R,7E,17beta)-17-[(2R)-5-ethyl-5-hydroxyheptan-2-yl]-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol (C28 H46 O3, 430.7 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
YSD
Formula
C28 H46 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

YSD in 2 structures; the first of them:

  • 3VRV · VDR ligand binding domain in complex with 2-Methylidene-26,27-dimethyl-19,24-dinor-1alpha… · YSD A501 · binds TYR143, TYR147, PHE150, LEU223, LEU226, ALA227, LEU229, VAL230 and 19 more
  • 3VRV · Vdr ligand binding domain in complex with 2-methylidene-26,27… · YSD A501 · binds TYR143, TYR147, PHE150, LEU223, LEU226, ALA227, LEU229, VAL230 and 19 more

Residues it binds most

LEU 2, TYR 2, SER 2, VAL 2, ALA 2, HIS 2, ILE 2, PHE 2, ARG 2, CYS 2 (residue and the binding sites it lines).

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