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Ligand · YS2

YS2 · (1R,3R,7E,17beta)-17-[(2R)-5-hydroxypentan-2-yl]-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol

YS2, (1R,3R,7E,17beta)-17-[(2R)-5-hydroxypentan-2-yl]-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol (C24 H38 O3, 374.6 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues…

Component
YS2
Formula
C24 H38 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

YS2 in 2 structures; the first of them:

  • 3VRT · VDR ligand binding domain in complex with 2-Mehylidene-19,25,26,27-tetranor-1alpha,24-dihy… · YS2 A501 · binds TYR143, TYR147, PHE150, LEU226, LEU229, VAL230, SER233, ILE264 and 12 more
  • 3VRT · Vdr ligand binding domain in complex with 2-mehylidene-19,25,26,27… · YS2 A501 · binds TYR143, TYR147, PHE150, LEU226, LEU229, VAL230, SER233, ILE264 and 12 more

Residues it binds most

LEU 2, SER 2, TYR 2, HIS 2, ILE 2, VAL 2, ARG 2, CYS 2, MET 2, PHE 2 (residue and the binding sites it lines).

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