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Ligand · YRJ

YRJ · 3-({[(4-nitrophenyl)carbamoyl]amino}methyl)-1-(5-O-phosphono-beta-D-ribofuranosyl)pyridin-1-ium

YRJ, 3-({[(4-nitrophenyl)carbamoyl]amino}methyl)-1-(5-O-phosphono-beta-D-ribofuranosyl)pyridin-1-ium (C18 H22 N4 O10 P +1, 485.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
YRJ
Formula
C18 H22 N4 O10 P +1
Class
ligand
Structures
2
PDB entries
1

Binding sites

YRJ in 2 structures; the first of them:

  • 7M6K · Crystal structure of the ARM domain from Drosophila SARM1 in complex with VMN · YRJ A701 · binds TRP385, HIS392, TYR396, LEU428, GLU429, GLN430, CYS431, LEU432 and 15 more
  • 7M6K · Crystal structure of the arm domain from drosophila SARM1 in complex with vmn · YRJ A701 · binds TRP385, HIS392, TYR396, LEU428, GLU429, GLN430, CYS431, LEU432 and 15 more

Residues it binds most

GLN 4, HIS 4, LYS 4, LEU 4, THR 4, ALA 4, ARG 4, ASN 4, CYS 4, GLU 4 (residue and the binding sites it lines).

Found with

  • NA · Sodium ion

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