GL1X · GenesisL1 explorer

Ligand · YOD

YOD · (1R,3S,5S,7S)-N-[(1r,4R)-4-aminocyclohexyl]-3-[(methylsulfanyl)methyl]-5-phenyladamantane-1-carboxamide

YOD, (1R,3S,5S,7S)-N-[(1r,4R)-4-aminocyclohexyl]-3-[(methylsulfanyl)methyl]-5-phenyladamantane-1-carboxamide (C25 H36 N2 O S, 412.6 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with…

Component
YOD
Formula
C25 H36 N2 O S
Class
ligand
Structures
2
PDB entries
1

Binding sites

YOD in 2 structures; the first of them:

  • 7LYD · Crystal Structure of Ebola zaire Envelope glycoprotein GP in complex with compound… · YOD A605 · binds ARG64, VAL66, GLY67, ALA101, GLY102, LEU186, LEU515, TYR517 and 2 more
  • 7LYD · Crystal structure of ebola zaire envelope glycoprotein gp in complex with compound… · YOD A605 · binds ARG64, VAL66, GLY67, ALA101, GLY102, LEU186, LEU515, TYR517 and 2 more

Residues it binds most

GLY 2, LEU 2, ALA 2, ARG 2, MET 2, THR 2, TYR 2, VAL 2 (residue and the binding sites it lines).

Found with

  • BMA · beta-D-mannopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • GOL · Glycerol

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