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Ligand · YO5

YO5 · (1R)-1,5-anhydro-1-(phosphonomethyl)-D-glucitol

YO5, (1R)-1,5-anhydro-1-(phosphonomethyl)-D-glucitol (C7 H15 O8 P, 258.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
YO5
Formula
C7 H15 O8 P
Class
sugar
Structures
2
PDB entries
1

Binding sites

YO5 in 2 structures; the first of them:

  • 4C4R · Structure of beta-phosphoglucomutase in complex with a phosphonate analogue of… · YO5 A1220 · binds ASP8, ASP10, HIS20, TRP24, LEU44, LYS45, GLY46, VAL47 and 10 more
  • 4C4R · Structure of beta-phosphoglucomutase in complex with a phosphonate analogue of… · YO5 A1220 · binds ASP8, ASP10, HIS20, TRP24, LEU44, LYS45, GLY46, VAL47 and 10 more

Residues it binds most

SER 2, LYS 2, ASN 2, ASP 2, ALA 2, ARG 2, GLY 2, HIS 2, LEU 2, TRP 2 (residue and the binding sites it lines).

Found with

  • MGF · Trifluoromagnesate
  • MG · Magnesium ion

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