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Ligand · YND

YND · N-(3-chloropyridin-4-yl)-2-(3-methyl-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl)acetamide

YND, N-(3-chloropyridin-4-yl)-2-(3-methyl-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl)acetamide (C14 H12 Cl N5 O2, 317.7 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
YND
Formula
C14 H12 Cl N5 O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

YND in 2 structures; the first of them:

  • 7LWE · Crystal structure of the BCL6 BTB domain in complex with OICR-7629 · YND A201 · binds MET51, ALA52, CYS53, SER54, GLY55, TYR58, GLN113, MET114 and 2 more
  • 7LWE · Crystal structure of the BCL6 btb domain in complex with oicr-7629 · YND A201 · binds MET51, ALA52, CYS53, SER54, GLY55, TYR58, GLN113, MET114 and 2 more

Residues it binds most

MET 2, ALA 2, CYS 2, GLN 2, GLU 2, GLY 2, HIS 2, SER 2, TYR 2 (residue and the binding sites it lines).

Found with

  • CL · Chloride ion
  • ACT · Acetate ion
  • FMT · Formic acid

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