GL1X · GenesisL1 explorer

Ligand · YMV

YMV · (1S,2S)-1-hydroxy-2-((S)-4-methyl-2-(((((1r,4S)-4-phenylcyclohexyl)oxy)carbonyl)amino)pentanamido)-3-((S)-2-oxopyrrolidin-3-yl)propane-1-sulfonic acid

YMV, (1S,2S)-1-hydroxy-2-((S)-4-methyl-2-(((((1r,4S)-4-phenylcyclohexyl)oxy)carbonyl)amino)pentanamido)-3-((S)-2-oxopyrrolidin-3-yl)propane-1-sulfonic acid (C26 H39 N3 O8 S, 553.7 g/mol), in the MolNFT structures on GenesisL1: bound in 2…

Component
YMV
Formula
C26 H39 N3 O8 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

YMV in 2 structures; the first of them:

  • 7LZZ · Structure of SARS-CoV-2 3CL protease in complex with inhibitor 5c · YMV A402 · binds HIS41, MET49, TYR54, PHE140, LEU141, ASN142, GLY143, SER144 and 12 more
  • 7LZZ · Structure of SARS-cov-2 3CL protease in complex with inhibitor 5C · YMV A402 · binds HIS41, MET49, TYR54, PHE140, LEU141, ASN142, GLY143, SER144 and 12 more

Residues it binds most

HIS 2, MET 2, ALA 2, ARG 2, ASN 2, ASP 2, CYS 2, GLN 2, GLU 2, GLY 2 (residue and the binding sites it lines).

Found with

  • YMS · (1R,2S)-1-hydroxy-2-((S)-4-methyl-2-(((((1r,4S)-4-phenylcyclohexyl)oxy)carbonyl)amino)pentanamido)-3-((S)-2-oxopyrrolidin-3-yl)propane-1-sulfonic acid

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