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Ligand · YMK

YMK · (2~{R})-3-bis[2-methyl-5-(trifluoromethyl)pyrazol-3-yl]boranyloxypropane-1,2-diol

YMK, (2~{R})-3-bis[2-methyl-5-(trifluoromethyl)pyrazol-3-yl]boranyloxypropane-1,2-diol (C13 H15 B F6 N4 O3, 400.1 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues within…

Component
YMK
Formula
C13 H15 B F6 N4 O3
Class
ligand
Structures
1
PDB entries
1

Binding sites

YMK in 1 structure; the first of them:

  • 8PF8 · Structure of Mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex… · YMK A806 · binds PRO140, THR143, LEU144, ARG175, ALA302, PHE303, LEU307, ILE664 and 2 more

Residues it binds most

ILE 1, LEU 1, ALA 1, ARG 1, MET 1, PHE 1, PRO 1, THR 1 (residue and the binding sites it lines).

Found with

  • JXL · [2-methyl-5-(trifluoromethyl)pyrazol-3-yl]boronic acid
  • YLN · bis[2-methyl-5-(trifluoromethyl)pyrazol-3-yl]-bis(oxidanyl)boranuide
  • YLZ · [(2~{R})-2,3-bis(oxidanyl)propoxy]-[2-methyl-5-(trifluoromethyl)pyrazol-3-yl]borinic acid
  • SO4 · Sulfate ion
  • GOL · Glycerol

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