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Ligand · YMB

YMB · 7-[(1~{S})-1-[5-[(3-azanylazetidin-1-yl)methyl]-2-oxidanylidene-1,3-oxazolidin-3-yl]ethyl]-3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid

YMB, 7-[(1~{S})-1-[5-[(3-azanylazetidin-1-yl)methyl]-2-oxidanylidene-1,3-oxazolidin-3-yl]ethyl]-3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid (C26 H29 F N4 O6 S, 544.6 g/mol), in the MolNFT structures on…

Component
YMB
Formula
C26 H29 F N4 O6 S
Class
ligand
Structures
1
PDB entries
1

Binding sites

YMB in 1 structure; the first of them:

  • 8PGJ · Crystal structure of the metallo-beta-lactamase VIM1 with 2985 · YMB A303 · binds PHE62, TYR67, TRP87, HIS116, ASP117, ASP118, GLU146, HIS179 and 11 more

Residues it binds most

HIS 1, ASP 1, ALA 1, SER 1, ASN 1, CYS 1, GLU 1, GLY 1, PHE 1, THR 1 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • DMS · Dimethyl sulfoxide

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