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Ligand · YM9

YM9 · (5M)-5-(2-chloro-5-fluoro-4-methylphenyl)-1H-benzimidazole-7-carboxylic acid

YM9, (5M)-5-(2-chloro-5-fluoro-4-methylphenyl)-1H-benzimidazole-7-carboxylic acid (C15 H10 Cl F N2 O2, 304.7 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with its residues within 4.5…

Component
YM9
Formula
C15 H10 Cl F N2 O2
Class
ligand
Structures
3
PDB entries
3

Binding sites

YM9 in 3 structures; the first of them:

  • 7FTO · Crystal Structure of human cyclic GMP-AMP synthase in complex with… · YM9 A602 · binds ARG376, LEU377, SER378, PHE379, SER380, ILE382, GLU383, ILE386 and 6 more
  • 7FTQ · Crystal Structure of human cyclic GMP-AMP synthase in complex with… · YM9 A602 · binds LYS219, ARG376, SER378, PHE379, SER380, ILE382, GLU383, ILE386 and 6 more
  • 7FU2 · Crystal Structure of human cyclic GMP-AMP synthase in complex with… · YM9 A601 · binds LYS219, ARG376, SER378, PHE379, SER380, ILE382, GLU383, ILE386 and 6 more

Residues it binds most

PHE 3, ILE 3, SER 3, TYR 3, LYS 3, ARG 3, GLU 3, THR 3, LEU 1 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • PO4 · Phosphate ion

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