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Ligand · YLV

YLV · (1R,2S)-1-hydroxy-2-((S)-4-methyl-2-((((perfluorophenyl)methoxy)carbonyl)amino) pentanamido)-3-((R)-2-oxo-2,3-dihydro-1H-pyrrol-3-yl) propane-1-sulfonic acid

YLV, (1R,2S)-1-hydroxy-2-((S)-4-methyl-2-((((perfluorophenyl)methoxy)carbonyl)amino) pentanamido)-3-((R)-2-oxo-2,3-dihydro-1H-pyrrol-3-yl) propane-1-sulfonic acid (C21 H24 F5 N3 O8 S, 573.5 g/mol), in the MolNFT structures on GenesisL1…

Component
YLV
Formula
C21 H24 F5 N3 O8 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

YLV in 2 structures; the first of them:

  • 7M04 · Structure of SARS-CoV-2 3CL protease in complex with inhibitor 21c · YLV A401 · binds HIS41, PHE140, LEU141, ASN142, SER144, CYS145, HIS163, HIS164 and 10 more
  • 7M04 · Structure of SARS-cov-2 3CL protease in complex with inhibitor 21C · YLV A401 · binds HIS41, PHE140, LEU141, ASN142, SER144, CYS145, HIS163, HIS164 and 10 more

Residues it binds most

HIS 4, LEU 4, MET 4, ALA 4, ARG 4, ASN 4, ASP 4, CYS 4, GLN 4, GLU 4 (residue and the binding sites it lines).

Found with

  • YM1 · (1S,2S)-1-hydroxy-2-((S)-4-methyl-2-((((perfluorophenyl)methoxy)carbonyl)amino) pentanamido)-3-((R)-2-oxo-2,3-dihydro-1H-pyrrol-3-yl) propane-1-sulfonic acid
  • PG4 · Tetraethylene glycol

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