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Ligand · YK5

YK5 · 7-[(1~{S})-1-[5-(carbamimidamidomethyl)-2-oxidanylidene-1,3-oxazolidin-3-yl]ethyl]-3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid

YK5, 7-[(1~{S})-1-[5-(carbamimidamidomethyl)-2-oxidanylidene-1,3-oxazolidin-3-yl]ethyl]-3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid (C24 H26 F N5 O6 S, 531.6 g/mol), in the MolNFT structures on GenesisL1…

Component
YK5
Formula
C24 H26 F N5 O6 S
Class
ligand
Structures
1
PDB entries
1

Binding sites

YK5 in 1 structure; the first of them:

  • 8PGL · Crystal structure of the metallo-beta-lactamase VIM1 with 3027 · YK5 A303 · binds PHE62, TYR67, TRP87, HIS116, ASP117, ASP118, GLU146, HIS179 and 11 more

Residues it binds most

HIS 1, ASP 1, ALA 1, SER 1, ASN 1, CYS 1, GLU 1, GLY 1, PHE 1, THR 1 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • DMS · Dimethyl sulfoxide

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