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Ligand · YHZ

YHZ · 1-[(4-aminopyrimidin-5-yl)amino]-2,5-anhydro-1-deoxy-6-O-[(S)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]oxy}phosphoryl]-D-allitol

YHZ, 1-[(4-aminopyrimidin-5-yl)amino]-2,5-anhydro-1-deoxy-6-O-[(S)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]oxy}phosphoryl]-D-allitol (C11 H21 N4 O12 P3, 494.2 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB…

Component
YHZ
Formula
C11 H21 N4 O12 P3
Class
ligand
Structures
1
PDB entries
1

Binding sites

YHZ in 1 structure; the first of them:

  • 8FXI · Cryo-EM structure of Stanieria sp. CphA2 in complex with ADPCP and 4x(beta-Asp-Arg) · YHZ C701 · binds GLY261, HIS262, ILE265, VAL298, GLU299, ILE302, ASP306, VAL391 and 3 more

Residues it binds most

ILE 1, GLU 1, VAL 1, ASP 1, GLY 1, HIS 1 (residue and the binding sites it lines).

Found with

  • ACP · Phosphomethylphosphonic acid adenylate ester
  • MG · Magnesium ion

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