GL1X · GenesisL1 explorer

Ligand · YHF

YHF · 5'-O-[(S)-(cyclopentyloxy)(hydroxy)phosphoryl]adenosine

YHF, 5'-O-[(S)-(cyclopentyloxy)(hydroxy)phosphoryl]adenosine (C15 H22 N5 O7 P, 415.3 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…

Component
YHF
Formula
C15 H22 N5 O7 P
Class
ligand
Structures
3
PDB entries
3

Binding sites

YHF in 3 structures; the first of them:

  • 8G0R · Crystal Structure of Acetyl-CoA synthetase in complex with a cyclopentyl ester AMP… · YHF A701 · binds ILE335, THR336, SER410, VAL411, GLY412, GLU413, PRO414, ASP436 and 9 more
  • 8G0S · Crystal Structure of Acetyl-CoA synthetase in complex with a cyclopentyl ester AMP… · YHF A702 · binds ILE335, THR336, VAL411, GLY412, GLU413, PRO414, ASP436, THR437 and 9 more
  • 8W0C · Crystal structure of Acetyl-CoA synthetase 2 from Candida albicans in complex with a… · YHF A701 · binds ILE340, THR341, VAL416, GLY417, GLU418, PRO419, ASP441, THR442 and 12 more

Residues it binds most

THR 9, ASP 9, GLU 9, ILE 9, GLY 9, PRO 9, TRP 9, TYR 9, VAL 9, ARG 7 (residue and the binding sites it lines).

Found with

  • CL · Chloride ion
  • NA · Sodium ion
  • SO4 · Sulfate ion
  • GOL · Glycerol

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.