Ligand · YG4
YG4 · [(2~{R},3~{R},4~{R},5~{R})-5-(6-azanyl-7,8-dihydropurin-9-yl)-2-[[[[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1,8-dihydropurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-4-methoxy-oxolan-3-yl] [(2~{R}, 3~{S},4~{R},5~{S})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
YG4, [(2~{R},3~{R},4~{R},5~{R})-5-(6-azanyl-7,8-dihydropurin-9-yl)-2-[[[[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1,8-dihydropurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl…
- Component
- YG4
- Formula
- C31 H46 N12 O25 P4
- Class
- ligand
- Structures
- 3
- PDB entries
- 2
Binding sites
YG4 in 3 structures; the first of them:
- 7LW3 · Structure of SARS-CoV-2 nsp16/nsp10 complex in presence of Cap-1 analog (m7GpppAmU) and… · YG4 A704 · binds CYS25, ASP26, LEU27, TYR30, ASN43, LYS46, ASP75, ASP130 and 11 more
- 8JCE · Cryo-EM Structure of Chikungunya Virus Nonstructural Protein 1 with m7GpppAmU · YG4 A1003 · binds ASP7, THR33, PRO34, ASN35, ALA37, ALA40, ARG41, SER44 and 18 more
- 7LW3 · Structure of SARS-cov-2 NSP16/NSP10 complex in presence of cap-1 analog (M7GPPPAMU) and… · YG4 A704 · binds CYS25, ASP26, LEU27, TYR30, ASN43, LYS46, ASP75, ASP130 and 11 more
Residues it binds most
ARG 12, ASP 14, TYR 14, ASN 14, GLU 14, THR 14, ALA 12, VAL 12, LYS 14, SER 14 (residue and the binding sites it lines).
Found with
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.