Ligand · YD1
YD1 · 6-[4-(3,4-dichlorophenyl)piperazin-1-yl]carbonyl-1~{H}-pyrimidine-2,4-dione
YD1, 6-[4-(3,4-dichlorophenyl)piperazin-1-yl]carbonyl-1~{H}-pyrimidine-2,4-dione (C15 H14 Cl2 N4 O3, 369.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5…
- Component
- YD1
- Formula
- C15 H14 Cl2 N4 O3
- Class
- ligand
- Structures
- 4
- PDB entries
- 2
Binding sites
YD1 in 4 structures; the first of them:
- 7LTJ · Room-temperature X-ray structure of SARS-CoV-2 main protease (3CL Mpro) in complex with a… · YD1 A401 · binds HIS41, CYS44, MET49, TYR54, PHE140, LEU141, ASN142, GLY143 and 10 more
- 7N8C · Joint X-ray/neutron structure of SARS-CoV-2 main protease (Mpro) in complex with… · YD1 A401 · binds HIS41, CYS44, MET49, TYR54, PHE140, LEU141, ASN142, GLY143 and 10 more
- 7LTJ · Room-temperature X-ray structure of SARS-cov-2 main protease (3CL mpro) in complex with a… · YD1 A401 · binds HIS41, CYS44, MET49, TYR54, PHE140, LEU141, ASN142, GLY143 and 10 more
- 7N8C · Joint X-RAY/NEUTRON structure of SARS-cov-2 main protease (mpro) in complex with… · YD1 A401 · binds HIS41, CYS44, MET49, TYR54, PHE140, LEU141, ASN142, GLY143 and 10 more
Residues it binds most
HIS 4, CYS 4, MET 4, ARG 4, ASN 4, ASP 4, GLN 4, GLU 4, GLY 4, LEU 4 (residue and the binding sites it lines).
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