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Ligand · YCH

YCH · [(4~{S})-2-oxidanyl-1,3,2-dioxaborolan-4-yl]methanol

YCH, [(4~{S})-2-oxidanyl-1,3,2-dioxaborolan-4-yl]methanol (C3 H7 B O4, 117.9 g/mol), in the MolNFT structures on GenesisL1: bound in 12 records (12 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
YCH
Formula
C3 H7 B O4
Class
ligand
Structures
12
PDB entries
12

Binding sites

YCH in 12 structures; the first of them:

  • 8PCL · Structure of serine-beta-lactamase CTX-M-14 following the time-resolved active site… · YCH A301 · binds CYS69, SER70, LYS73, ASN104, TYR105, SER130, ASN132, GLU166 and 3 more
  • 8PCM · Structure of serine-beta-lactamase CTX-M-14 following the time-resolved active site… · YCH A301 · binds CYS69, SER70, LYS73, ASN104, TYR105, SER130, ASN132, ASN170 and 2 more
  • 8PCN · Structure of serine-beta-lactamase CTX-M-14 following the time-resolved active site… · YCH A301 · binds CYS69, SER70, LYS73, ASN104, TYR105, SER130, ASN132, GLU166 and 3 more
  • 8PCO · Structure of serine-beta-lactamase CTX-M-14 following the time-resolved active site… · YCH A301 · binds CYS69, SER70, LYS73, ASN104, TYR105, SER130, ASN132, ASN170 and 2 more
  • 8PCP · Structure of serine-beta-lactamase CTX-M-14 following the time-resolved active site… · YCH A301 · binds CYS69, SER70, LYS73, ASN104, TYR105, SER130, ASN132, ASN170 and 2 more
  • 8PCQ · Structure of serine-beta-lactamase CTX-M-14 following the time-resolved active site… · YCH A301 · binds CYS69, SER70, LYS73, ASN104, TYR105, SER130, ASN132, ASN170 and 2 more
  • 8PCR · Structure of serine-beta-lactamase CTX-M-14 following the time-resolved active site… · YCH A301 · binds CYS69, SER70, LYS73, ASN104, TYR105, SER130, ASN132, ASN170 and 2 more
  • 8PCS · Structure of serine-beta-lactamase CTX-M-14 following the time-resolved active site… · YCH A301 · binds CYS69, SER70, LYS73, ASN104, TYR105, SER130, ASN132, ASN170 and 2 more
  • 8PCT · Structure of serine-beta-lactamase CTX-M-14 following the time-resolved active site… · YCH A301 · binds CYS69, SER70, LYS73, ASN104, TYR105, SER130, ASN132, ASN170 and 2 more
  • 8PCU · Structure of serine-beta-lactamase CTX-M-14 following the time-resolved active site… · YCH A301 · binds CYS69, SER70, LYS73, ASN104, TYR105, SER130, ASN132, ASN170 and 2 more
  • 8PCV · Structure of serine-beta-lactamase CTX-M-14 following the time-resolved active site… · YCH A301 · binds CYS69, SER70, LYS73, ASN104, TYR105, SER130, ASN132, ASN170 and 2 more
  • 8R7M · CTX-M14 in complex with boric acid and 1,2-diol boric ester · YCH A303 · binds CYS69, SER70, LYS73, ASN104, TYR105, SER130, ASN132, ASN170 and 2 more

Residues it binds most

ASN 12, SER 12, CYS 12, GLY 12, LYS 12, TYR 12, GLU 2 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • BO4 · Borate ion
  • NA · Sodium ion
  • BO3 · Boric acid
  • GOL · Glycerol

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