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Ligand · YAJ

YAJ · ~{N}-[(3~{R},5~{S})-5-(hydroxymethyl)-1-methyl-pyrrolidin-3-yl]-2-(3-oxidanylidene-4~{H}-1,4-benzoxazin-6-yl)ethanamide

YAJ, ~{N}-[(3~{R},5~{S})-5-(hydroxymethyl)-1-methyl-pyrrolidin-3-yl]-2-(3-oxidanylidene-4~{H}-1,4-benzoxazin-6-yl)ethanamide (C16 H21 N3 O4, 319.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every…

Component
YAJ
Formula
C16 H21 N3 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

YAJ in 2 structures; the first of them:

  • 7LPQ · Crystal structure of Cryptococcus neoformans sterylglucosidase 1 with hit 9 · YAJ A901 · binds LYS47, ASP144, MET196, TRP198, GLU270, VAL430, LEU431, HIS451 and 10 more
  • 7LPQ · Crystal structure of cryptococcus neoformans sterylglucosidase 1 with hit 9 · YAJ A901 · binds LYS47, ASP144, MET196, TRP198, GLU270, VAL430, LEU431, HIS451 and 10 more

Residues it binds most

GLU 8, LEU 8, TRP 8, ALA 8, ASP 8, GLY 8, HIS 8, LYS 8, MET 8, PHE 8 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • GOL · Glycerol

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