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Ligand · Y82

Y82 · 5-[(1R,3S,4R)-1-azabicyclo[2.2.2]octan-3-yl]-1,3,4,5-tetrahydro-6H-azepino[5,4,3-cd]indazol-6-one

Y82, 5-[(1R,3S,4R)-1-azabicyclo[2.2.2]octan-3-yl]-1,3,4,5-tetrahydro-6H-azepino[5,4,3-cd]indazol-6-one (C17 H20 N4 O, 296.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its…

Component
Y82
Formula
C17 H20 N4 O
Class
ligand
Structures
2
PDB entries
2

Binding sites

Y82 in 2 structures; the first of them:

  • 8FRX · Full-length mouse 5-HT3A receptor in complex with SMP100, pre-activated · Y82 A501 · binds ASN101, THR154, SER155, TRP156, PHE199, ILE201, ASP202, TYR207 and 5 more
  • 8FSP · Full-length mouse 5-HT3A receptor in complex with SMP100, open-like · Y82 A504 · binds ASP42, ILE44, TRP63, ARG65, TYR126, ASN101, THR154, SER155 and 5 more

Residues it binds most

ASP 10, ILE 10, TRP 10, TYR 10, ARG 10, ASN 10, PHE 10, SER 10, THR 10 (residue and the binding sites it lines).

Found with

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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