Ligand · Y7K

Y7K · (2R,4R,4aS,5aR,6S,7S,8R,9S,9aR,10aS)-2-methyl-6,8-bis(methylamino)-4-({[2-(oxan-4-yl)ethyl]amino}methyl)octahydro-2H-pyrano[2,3-b][1,4]benzodioxine-4,4a,7,9(10aH)-tetrol

Y7K, (2R,4R,4aS,5aR,6S,7S,8R,9S,9aR,10aS)-2-methyl-6,8-bis(methylamino)-4-({[2-(oxan-4-yl)ethyl]amino}methyl)octahydro-2H-pyrano[2,3-b][1,4]benzodioxine-4,4a,7,9(10aH)-tetrol (C22 H41 N3 O8, 475.6 g/mol), in the MolNFT structures on…

Component: Y7K
Formula: C22 H41 N3 O8
Class: ligand
Structures: 1
PDB entries: 1

Binding sites

Y7K in 1 structure; the first of them:

8UVS · Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with… · Y7K 1a1842 · binds C1063, G1064, C1066, G1068, C1069, U1070, A1191, C1192 and 10 more

Residues it binds most

G 2, C 2, ARG 2, GLY 2, U 2, A 2, ALA 2, GLN 1 (residue and the binding sites it lines).

Found with

SF4 · Iron/sulfur cluster
K · Potassium ion
MG · Magnesium ion
ZN · Zinc ion

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