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Ligand · Y77

Y77 · [(~{Z})-5-[(azanylidene-$l^{4}-azanylidene)amino]-3-methyl-pent-2-enyl] dihydrogen phosphate

Y77, [(~{Z})-5-[(azanylidene-$l^{4}-azanylidene)amino]-3-methyl-pent-2-enyl] dihydrogen phosphate (C6 H13 N3 O4 P, 222.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues…

Component
Y77
Formula
C6 H13 N3 O4 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

Y77 in 2 structures; the first of them:

  • 7LNW · I146A mutant of the isopentenyl phosphate kinase from Candidatus methanomethylophilus… · Y77 A302 · binds LYS5, GLY44, ALA45, GLY46, GLY49, HIS50, ALA53, GLY134 and 7 more
  • 7LNW · I146A mutant of the isopentenyl phosphate kinase from candidatus methanomethylophilus… · Y77 A302 · binds GLY44, ALA45, GLY46, GLY49, HIS50, ALA53, GLY134, ASP135 and 4 more

Residues it binds most

GLY 4, ALA 4, ASP 4, VAL 4, HIS 4, ILE 2, SER 4, LYS 3, GLN 2 (residue and the binding sites it lines).

Found with

  • ADP · Adenosine-5'-diphosphate

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