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Ligand · Y6K

Y6K · ~{O}3-~{tert}-butyl ~{O}1-methyl (1~{S},3~{R},5~{R})-6-methylidene-4-oxidanylidene-bicyclo[3.2.1]octane-1,3-dicarboxylate

Y6K, ~{O}3-~{tert}-butyl ~{O}1-methyl (1~{S},3~{R},5~{R})-6-methylidene-4-oxidanylidene-bicyclo[3.2.1]octane-1,3-dicarboxylate (C16 H22 O5, 294.3 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding…

Component
Y6K
Formula
C16 H22 O5
Class
ligand
Structures
1
PDB entries
1

Binding sites

Y6K in 1 structure; the first of them:

  • 8R5E · JNK1 covalently bound to RU77 cyclohexe based inhibitor · Y6K A403 · binds VAL118, MET121, LEU123, GLU126, ARG127, TYR130, LEU131, VAL159 and 3 more

Residues it binds most

LEU 1, VAL 1, ARG 1, ASP 1, CYS 1, GLU 1, MET 1, TRP 1, TYR 1 (residue and the binding sites it lines).

Found with

  • ANP · Phosphoaminophosphonic acid-adenylate ester
  • MG · Magnesium ion
  • GOL · Glycerol

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