GL1X · GenesisL1 explorer

Ligand · Y4F

Y4F · Cyclic (adenosine-(2'-5')-monophosphate-adenosine-(3'-5')-monophosphate

Y4F, Cyclic (adenosine-(2'-5')-monophosphate-adenosine-(3'-5')-monophosphate (C20 H24 N10 O12 P2, 658.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å…

Component
Y4F
Formula
C20 H24 N10 O12 P2
Class
ligand
Structures
2
PDB entries
2

Binding sites

Y4F in 2 structures; the first of them:

  • 8FMF · Structure of CBASS Cap5 from Pseudomonas syringae as an activated tetramer with the… · Y4F A401 · binds HIS138, PHE139, LEU216, ALA217, ASP218, ILE219, LEU222, PHE240 and 19 more
  • 8FMG · Structure of CBASS Cap5 from Pseudomonas syringae as an activated tetramer with the… · Y4F A404 · binds HIS138, PHE139, LEU216, ALA217, ASP218, ILE219, LEU222, PHE240 and 19 more

Residues it binds most

ALA 16, PHE 16, ARG 16, ILE 16, PRO 16, ASP 16, LEU 16, GLN 16, HIS 8, SER 16 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ZN · Zinc ion
  • RWB · dodecaethylene glycol monomethyl ether
  • GOL · Glycerol
  • P6G · Hexaethylene glycol

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.