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Ligand · Y39

Y39 · (1S,2S)-2-nonylcyclopropanecarboxylic acid

Y39, (1S,2S)-2-nonylcyclopropanecarboxylic acid (C13 H24 O2, 212.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
Y39
Formula
C13 H24 O2
Class
ligand
Structures
4
PDB entries
2

Binding sites

Y39 in 4 structures; the first of them:

  • 4PG0 · Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial… · Y39 A303 · binds ILE37, ILE40, VAL41, GLY44, GLU45, ALA48, GLU73, HIS76 and 14 more
  • 4PG1 · Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial… · Y39 A303 · binds ILE37, ILE40, VAL41, GLY44, GLU45, ALA48, GLU73, HIS76 and 15 more
  • 4PG0 · Insights into substrate and metal binding from the crystal structure of cyanobacterial… · Y39 A303 · binds ILE37, ILE40, VAL41, GLY44, GLU45, ALA48, GLU73, HIS76 and 14 more
  • 4PG1 · Insights into substrate and metal binding from the crystal structure of cyanobacterial… · Y39 A303 · binds ILE37, ILE40, VAL41, GLY44, GLU45, ALA48, GLU73, HIS76 and 15 more

Residues it binds most

ALA 6, GLU 4, ILE 6, LEU 6, PHE 6, HIS 4, VAL 4, GLN 4, GLY 4, MET 4 (residue and the binding sites it lines).

Found with

  • FE · Fe (III) ion
  • DMS · Dimethyl sulfoxide

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