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Ligand · Y21

Y21 · (3S)-10-[(3R)-3-(1-aminocyclopropyl)pyrrolidin-1-yl]-9-fluoro-3-methyl-5-oxo-2,3-dihydro-5H-[1,4]oxazino[2,3, 4-ij]quinoline-6-carboxylic acid

Y21, (3S)-10-[(3R)-3-(1-aminocyclopropyl)pyrrolidin-1-yl]-9-fluoro-3-methyl-5-oxo-2,3-dihydro-5H-[1,4]oxazino[2,3, 4-ij]quinoline-6-carboxylic acid (C20 H22 F N3 O4, 387.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records…

Component
Y21
Formula
C20 H22 F N3 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

Y21 in 2 structures; the first of them:

  • 7LHZ · K. pneumoniae Topoisomerase IV (ParE-ParC) in complex with DNA and… · Y21 K601 · binds LYS442, GLY443, GLU461, GLY1078, ASP1079, SER1080, ALA1081, DC515 and 3 more
  • 7LHZ · K. pneumoniae topoisomerase IV (pare-parc) in complex with DNA and… · Y21 K601 · binds LYS442, GLY443, GLU461, GLY1078, ASP1079, SER1080, ALA1081, DC515 and 3 more

Residues it binds most

GLY 8, LYS 8, ALA 8, ASP 8, DA 8, DC 8, DG 8, DT 8, SER 8, GLU 6 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • MPD · (4S)-2-methyl-2,4-pentanediol

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