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Ligand · Y1Y

Y1Y · 3-amino-2,3-dideoxy-5-O-(5-methylthiophene-2-carbonyl)-D-erythro-pentonic acid

Y1Y, 3-amino-2,3-dideoxy-5-O-(5-methylthiophene-2-carbonyl)-D-erythro-pentonic acid (C11 H15 N O5 S, 273.3 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues within 4.5 Å…

Component
Y1Y
Formula
C11 H15 N O5 S
Class
ligand
Structures
1
PDB entries
1

Binding sites

Y1Y in 1 structure; the first of them:

  • 6X8H · Caspase-8 in complex with aomk inhibitor, ac-DW3-ke, forms tetrahedral adduct · Y1Y C506 · binds ILE257, ARG260, SER316, HIS317, GLY318, ASP319, GLN358, CYS360 and 4 more

Residues it binds most

ARG 1, SER 1, ASP 1, CYS 1, GLN 1, GLY 1, HIS 1, ILE 1, PHE 1, THR 1 (residue and the binding sites it lines).

Found with

  • ACE · Acetyl group

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