Ligand · Y16
Y16 · (E,2R,3R,4S,5R)-N-(2-azanyl-2-oxidanylidene-ethyl)-2-methoxy-8,8-dimethyl-3,4,5-tris(oxidanyl)non-6-enamide
Y16, (E,2R,3R,4S,5R)-N-(2-azanyl-2-oxidanylidene-ethyl)-2-methoxy-8,8-dimethyl-3,4,5-tris(oxidanyl)non-6-enamide (C14 H26 N2 O6, 318.4 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site…
- Component
- Y16
- Formula
- C14 H26 N2 O6
- Class
- ligand
- Structures
- 4
- PDB entries
- 2
Binding sites
Y16 in 4 structures; the first of them:
- 3PKB · M. tuberculosis MetAP with bengamide analog Y16, in Mn form · Y16 A286 · binds THR94, TYR97, PHE100, CYS105, CYS113, HIS114, ASP131, THR133 and 12 more
- 4FLI · Human MetAP1 with bengamide analog Y16, in Mn form · Y16 A503 · binds PRO192, TYR195, PHE198, CYS203, CYS211, HIS212, ASP229, THR231 and 12 more
- 3PKB · M. tuberculosis metap with bengamide analog Y16, in mn form · Y16 A286 · binds THR94, TYR97, PHE100, CYS105, CYS113, HIS114, ASP131, THR133 and 12 more
- 4FLI · Human METAP1 with bengamide analog Y16, in mn form · Y16 A503 · binds PRO192, TYR195, PHE198, CYS203, CYS211, HIS212, ASP229, THR231 and 12 more
Residues it binds most
HIS 4, ASP 4, CYS 4, PHE 4, GLU 4, THR 4, TYR 4, GLN 4, MET 4, TRP 4 (residue and the binding sites it lines).
Found with
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