Ligand · XXD

XXD · (2S)-pentane-1,2,5-triol

XXD, (2S)-pentane-1,2,5-triol (C5 H12 O3, 120.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component: XXD
Formula: C5 H12 O3
Class: ligand
Structures: 2
PDB entries: 1

Binding sites

XXD in 2 structures; the first of them:

3UK4 · Crystal Structure of C-lobe of Bovine lactoferrin Complexed with 1,2,5-Pentanetriol at… · XXD A677 · binds GLY662, THR663, GLU664
3UK4 · Crystal structure of C-lobe of bovine lactoferrin complexed with 1,2, 5-pentanetriol at… · XXD A677 · binds GLY662, THR663, GLU664

Residues it binds most

GLU 2, GLY 2, THR 2 (residue and the binding sites it lines).

Found with

FE · Fe (III) ion
ZN · Zinc ion
NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
CO3 · Carbonate ion
SO4 · Sulfate ion

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