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Ligand · XPX

XPX · (2R)-3-[(hydroxy{[(2r,3r,5s,6r)-3,4,5-trihydroxy-2,6-bis(alpha-D-mannopyranosyloxy)cyclohexyl]oxy}phosphoryl)oxy]propan E-1,2-diyl dihexadecanoate

XPX, (2R)-3-[(hydroxy{[(2r,3r,5s,6r)-3,4,5-trihydroxy-2,6-bis(alpha-D-mannopyranosyloxy)cyclohexyl]oxy}phosphoryl)oxy]propan E-1,2-diyl dihexadecanoate (C53 H99 O23 P, 1135.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2…

Component
XPX
Formula
C53 H99 O23 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

XPX in 2 structures; the first of them:

  • 2GAZ · Mycobacterial lipoglycan presentation by CD1d · XPX A525 · binds PHE10, CYS12, VAL30, HIS38, TRP63, LEU66, MET69, PHE70 and 30 more
  • 2GAZ · Mycobacterial lipoglycan presentation by CD1D · XPX A525 · binds PHE10, CYS12, VAL30, HIS38, TRP63, LEU66, MET69, PHE70 and 30 more

Residues it binds most

LEU 2, VAL 2, PHE 2, ILE 2, TRP 2, ASP 2, CYS 2, GLY 2, THR 2, ALA 2 (residue and the binding sites it lines).

Found with

  • BMA · beta-D-mannopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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