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Ligand · XPS

XPS · 6-deoxy-6-(methylamino)-D-galactitol

XPS, 6-deoxy-6-(methylamino)-D-galactitol (C7 H17 N O5, 195.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
XPS
Formula
C7 H17 N O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

XPS in 2 structures; the first of them:

  • 7L2V · cryo-EM structure of RTX-bound minimal TRPV1 with NMDG at state b · XPS B902 · binds GLY643, MET644, GLY645, GLY645, ASP646, GLY643, MET644, GLY645
  • 7L2V · Cryo-EM structure of rtx-bound minimal TRPV1 with nmdg at state B · XPS B902 · binds GLY643, GLY645, GLY645, GLY645

Residues it binds most

GLY 2, MET 1, ASP 1 (residue and the binding sites it lines).

Found with

  • 6EU · resiniferatoxin
  • NA · Sodium ion

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