Ligand · XJD

XJD · (10R,13S)-16-amino-13-hydroxy-7,13-dioxo-8,12,14-trioxa-13lambda~5~-phosphahexadecan-10-yl tridecanoate

XJD, (10R,13S)-16-amino-13-hydroxy-7,13-dioxo-8,12,14-trioxa-13lambda~5~-phosphahexadecan-10-yl tridecanoate (C25 H50 N O8 P, 523.6 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its…

Component: XJD
Formula: C25 H50 N O8 P
Class: ligand
Structures: 1
PDB entries: 1

Binding sites

XJD in 1 structure; the first of them:

7L2H · Cryo-EM structure of unliganded full-length TRPV1 at neutral pH · XJD A902 · binds LEU585, LEU588, SER629, TYR631, CYS634, PHE638, ILE660, ILE661 and 1 more

Residues it binds most

LEU 4, ILE 4, CYS 4, PHE 4, SER 4, TYR 4, LYS 1 (residue and the binding sites it lines).

Found with

XJ7 · (2S)-1-(butanoyloxy)-3-{[(R)-hydroxy{[(1r,2r,3s,4s,5r, 6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propan-2-yl tridecanoate
NA · Sodium ion

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