Ligand · WYD

WYD · ~{N}-[(2~{R},3~{R},4~{R},5~{S},6~{R})-5-[(2~{S},3~{R}, 4~{S},5~{S},6~{R})-4-[[1-[[3-(3-azanylprop-1-ynyl) phenyl]methyl]-1,2,3-triazol-4-yl]methoxy]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]oxy-6-(hydroxymethyl)-4-oxidanyl-2-propoxy-oxan-3-yl]ethanamide

WYD, ~{N}-[(2~{R},3~{R},4~{R},5~{S},6~{R})-5-[(2~{S},3~{R}, 4~{S},5~{S},6~{R})-4-[[1-[[3-(3-azanylprop-1-ynyl) phenyl]methyl]-1,2,3-triazol-4-yl]methoxy]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]oxy-6-(hydroxymethyl)-4-oxidanyl-2-propox…

Component: WYD
Formula: C30 H43 N5 O11
Class: ligand
Structures: 2
PDB entries: 1

Binding sites

WYD in 2 structures; the first of them:

5MWX · Galectin-1 in Complex with Ligand JB60 · WYD A202 · binds SER29, VAL31, HIS44, ASN46, ARG48, HIS52, VAL59, ASN61 and 6 more
5MWX · Galectin-1 in complex with ligand JB60 · WYD A202 · binds SER29, VAL31, HIS44, ASN46, ARG48, HIS52, ASN61, TRP68 and 5 more

Residues it binds most

ARG 4, ASN 4, HIS 4, ASP 4, VAL 4, GLU 4, GLY 4, SER 4, TRP 3, PHE 1 (residue and the binding sites it lines).

Found with

SO4 · Sulfate ion
BME · Beta-mercaptoethanol

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