Ligand · WVA

WVA · 1'-{[5-(aminomethyl)-1-(4,4,4-trifluorobutyl)-1H-benzimidazol-2-yl]methyl}-6'-fluorospiro[cyclopropane-1,3'-indol]-2'(1'H)-one

WVA, 1'-{[5-(aminomethyl)-1-(4,4,4-trifluorobutyl)-1H-benzimidazol-2-yl]methyl}-6'-fluorospiro[cyclopropane-1,3'-indol]-2'(1'H)-one (C23 H22 F4 N4 O, 446.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry).…

Component: WVA
Formula: C23 H22 F4 N4 O
Class: ligand
Structures: 2
PDB entries: 1

Binding sites

WVA in 2 structures; the first of them:

7KQD · Prefusion RSV F Bound to RV521 · WVA F601 · binds PHE140, MET396, ASP486, GLU487, PHE488, ASP489
7KQD · Prefusion rsv F bound to RV521 · WVA F601 · binds PHE140, PHE488, ASP489

Residues it binds most

PHE 2, ASP 2, GLU 1, MET 1 (residue and the binding sites it lines).

Found with

SO4 · Sulfate ion

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