GL1X · GenesisL1 explorer

Ligand · WMJ

WMJ · 1-[[(2R,3S,5S)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methyl]-3-(4-nitrophenyl)urea

WMJ, 1-[[(2R,3S,5S)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methyl]-3-(4-nitrophenyl)urea (C17 H19 N5 O7, 405.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding…

Component
WMJ
Formula
C17 H19 N5 O7
Class
ligand
Structures
2
PDB entries
1

Binding sites

WMJ in 2 structures; the first of them:

  • 2YOH · Plasmodium falciparum thymidylate kinase in complex with a urea-alpha- deoxythymidine… · WMJ A211 · binds ASP17, ARG18, LYS21, SER22, PHE44, PRO45, LEU59, PHE74 and 8 more
  • 2YOH · Plasmodium falciparum thymidylate kinase in complex with a urea-alpha-deoxythymidine… · WMJ A211 · binds ASP17, ARG18, LYS21, SER22, PHE44, PRO45, LEU59, PHE74 and 8 more

Residues it binds most

TYR 4, ARG 4, PHE 4, SER 4, ASP 4, GLU 4, GLY 4, LEU 4, LYS 4, PRO 4 (residue and the binding sites it lines).

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