GL1X · GenesisL1 explorer

Ligand · WDA

WDA · 5-({4-[(1,3-dimethyl-2,6-dioxo-1,2,3,6-tetrahydro-7H-purin-7-yl)methyl]phenyl}methyl)pyrimidine-2,4,6(1H, 3H,5H)-trione

WDA, 5-({4-[(1,3-dimethyl-2,6-dioxo-1,2,3,6-tetrahydro-7H-purin-7-yl)methyl]phenyl}methyl)pyrimidine-2,4,6(1H, 3H,5H)-trione (C19 H18 N6 O5, 410.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every…

Component
WDA
Formula
C19 H18 N6 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

WDA in 2 structures; the first of them:

  • 7KG0 · Structure of human PARG complexed with PARG-131 · WDA A1001 · binds PHE738, VAL753, GLN754, TYR792, TYR795, ALA796, GLU797, PHE902
  • 7KG0 · Structure of human parg complexed with parg-131 · WDA A1001 · binds PHE738, VAL753, GLN754, TYR792, TYR795, ALA796, GLU797, PHE902

Residues it binds most

PHE 2, TYR 2, ALA 2, GLN 2, GLU 2, VAL 2 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • EDO · 1,2-ethanediol

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