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Ligand · WCG

WCG · (1S)-1,4-anhydro-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-1-(3-methoxynaphthalen-2-yl)-D-ribitol

WCG, (1S)-1,4-anhydro-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-1-(3-methoxynaphthalen-2-yl)-D-ribitol (C16 H21 O14 P3, 530.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry).…

Component
WCG
Formula
C16 H21 O14 P3
Class
ligand
Structures
2
PDB entries
1

Binding sites

WCG in 2 structures; the first of them:

  • 7KEE · RNA polymerase II elongation complex with unnatural base dTPT3, rNaMTP bound to E-site · WCG B2101 · binds ASN479, ASP481, ASP483, LYS752, ARG766, TYR769, ASP837, SER1019 and 1 more
  • 7KEE · RNA polymerase II elongation complex with unnatural base DTPT3, rnamtp bound to E-site · WCG B2101 · binds ASN479, ASP481, LYS752, ARG766, ASP837, SER1019, ARG1020

Residues it binds most

ASP 2, ARG 2, ASN 2, LYS 2, SER 2, TYR 1 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ZN · Zinc ion

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