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Ligand · WA5

WA5 · 4-azanylidene-N-[[2,4-bis(fluoranyl)phenyl]methyl]-1-oxidanyl-2-oxidanylidene-1,8-naphthyridine-3-carboxamide

WA5, 4-azanylidene-N-[[2,4-bis(fluoranyl)phenyl]methyl]-1-oxidanyl-2-oxidanylidene-1,8-naphthyridine-3-carboxamide (C16 H12 F2 N4 O3, 346.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site…

Component
WA5
Formula
C16 H12 F2 N4 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

WA5 in 2 structures; the first of them:

  • 5FRM · Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium… · WA5 D1018 · binds ASP128, TYR129, ASP185, PRO214, GLN215, GLU221, DG4, DC16 and 1 more
  • 5FRM · Crystal structure of the prototype foamy virus (pfv) intasome in complex with magnesium… · WA5 D1018 · binds ASP128, TYR129, ASP185, PRO214, GLN215, GLU221, DG4, DC16 and 1 more

Residues it binds most

ASP 2, DA 2, DC 2, DG 2, GLN 2, GLU 2, PRO 2, TYR 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ZN · Zinc ion
  • SO4 · Sulfate ion
  • GOL · Glycerol
  • MES · 2-(N-morpholino)-ethanesulfonic acid

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