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Ligand · VZY

VZY · N-(3-methylbenzene-1-carbonyl)glycine

VZY, N-(3-methylbenzene-1-carbonyl)glycine (C10 H11 N O3, 193.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
VZY
Formula
C10 H11 N O3
Class
ligand
Structures
3
PDB entries
2

Binding sites

VZY in 3 structures; the first of them:

  • 5SC5 · CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex… · VZY A201 · binds ARG33, PHE38, PHE60, ASN125, SER127, ALA128, PRO129, VAL137 and 2 more
  • 5S2M · Pandda analysis group deposition -- crystal structure of SARS-cov-2 NSP3 macrodomain in… · VZY A501 · binds ALA129, GLY130, PRO136, VAL155, PHE156, ASP157, LEU160
  • 5SC5 · CD44 pandda analysis group deposition -- the hyaluronan-binding domain of CD44 in complex… · VZY A201 · binds ARG33, PHE38, PHE60, ASN125, SER127, ALA128, ASP139, PRO141

Residues it binds most

PHE 3, PRO 3, ALA 3, ASP 3, ARG 2, ASN 2, SER 2, VAL 2, GLY 1, LEU 1 (residue and the binding sites it lines).

Found with

  • DMS · Dimethyl sulfoxide
  • EDO · 1,2-ethanediol

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