Ligand · VY5
VY5 · 2-acetamido-4-O-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-2-deoxy-alpha-D-glucopyranose
VY5, 2-acetamido-4-O-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-2-deoxy-alpha-D-glucopyranose (C16 H28 N2 O11, 424.4 g/mol), in the MolNFT structures on GenesisL1: bound in 7 records (7 PDB entries). Every binding site with its residues…
- Component
- VY5
- Formula
- C16 H28 N2 O11
- Class
- ligand
- Structures
- 7
- PDB entries
- 7
Binding sites
VY5 in 7 structures; the first of them:
- 8CWB · Laser off temperature-jump xfel structure of lysozyme bound to N,N'- diacetylchitobiose · VY5 A202 · binds GLU35, ASN46, ASP48, SER50, ASP52, GLN57, ILE58, ASN59 and 7 more
- 8CWC · 20NS temperature-jump (light) xfel structure of lysozyme bound to N, N'-diacetylchitobiose · VY5 A202 · binds GLU35, ASN46, ASP48, SER50, ASP52, GLN57, ILE58, ASN59 and 7 more
- 8CWD · 20NS temperature-jump (DARK1) xfel structure of lysozyme bound to N, N'-diacetylchitobiose · VY5 A202 · binds GLU35, ASN46, ASP48, SER50, ASP52, GLN57, ILE58, ASN59 and 7 more
- 8CWE · 20NS temperature-jump (DARK2) xfel structure of lysozyme bound to N, N'-diacetylchitobiose · VY5 A202 · binds GLU35, ASN46, ASP48, SER50, ASP52, GLN57, ILE58, ASN59 and 7 more
- 8CWF · 200US temperature-jump (light) xfel structure of lysozyme bound to N… · VY5 A202 · binds GLU35, ASN46, ASP48, SER50, ASP52, GLN57, ILE58, ASN59 and 7 more
- 8CWG · 200US temperature-jump (DARK1) xfel structure of lysozyme bound to N… · VY5 A202 · binds GLU35, ASN46, ASP48, SER50, ASP52, GLN57, ILE58, ASN59 and 7 more
- 8CWH · 200US temperature-jump (DARK2) xfel structure of lysozyme bound to N… · VY5 A202 · binds GLU35, ASN46, ASP48, SER50, ASP52, GLN57, ILE58, ASN59 and 7 more
Residues it binds most
TRP 7, ASN 7, ASP 7, ILE 7, ALA 7, ARG 7, GLN 7, GLU 7, SER 7, VAL 7 (residue and the binding sites it lines).
Found with
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