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Ligand · VSZ

VSZ · Cystargolide A (bound)

VSZ, Cystargolide A (bound) (C18 H32 N2 O6, 372.5 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with…

Component
VSZ
Formula
C18 H32 N2 O6
Class
ligand
Structures
4
PDB entries
4

Binding sites

VSZ in 4 structures; the first of them:

  • 8OLL · Staphylococcus aureus ClpP in complex with the natural product beta-lactone inhibitor… · VSZ A301 · binds PRO67, GLY68, GLY69, SER70, VAL71, ALA97, SER98, MET99 and 8 more
  • 8OLR · Structure of yeast 20S proteasome in complex with the natural product beta-lactone… · VSZ H301 · binds THR1, ARG19, SER20, THR21, CYS31, LYS33, GLY45, ALA46 and 7 more
  • 8R04 · Structure of Staphylococcus aureus ClpP Bound to the Covalent Active Site Inhibitor… · VSZ A301 · binds PRO74, GLY75, GLY76, SER77, VAL78, SER105, MET106, HIS130 and 7 more

Residues it binds most

GLY 62, PRO 56, SER 60, HIS 56, ILE 55, VAL 56, LEU 58, MET 58, THR 34, ARG 34 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • CL · Chloride ion

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