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Ligand · VQV

VQV · 1-(3,5-di-O-phosphono-alpha-L-xylofuranosyl)pyrimidine-2,4(1H,3H)-dione

VQV, 1-(3,5-di-O-phosphono-alpha-L-xylofuranosyl)pyrimidine-2,4(1H,3H)-dione (C9 H14 N2 O12 P2, 404.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the…

Component
VQV
Formula
C9 H14 N2 O12 P2
Class
ligand
Structures
2
PDB entries
1

Binding sites

VQV in 2 structures; the first of them:

  • 7K1O · Crystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with… · VQV A401 · binds HIS235, GLN245, LEU246, GLY247, GLY248, HIS250, LYS290, TRP333 and 3 more
  • 7K1O · Crystal structure of NSP15 endoribonuclease from SARS cov-2 in the complex with… · VQV A401 · binds HIS235, GLN245, LEU246, GLY247, GLY248, HIS250, LYS290, TRP333 and 3 more

Residues it binds most

GLY 6, HIS 6, GLU 6, LYS 6, THR 6, TRP 6, TYR 6, GLN 4, LEU 4 (residue and the binding sites it lines).

Found with

  • EDO · 1,2-ethanediol

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