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Ligand · VQR

VQR · methyl (4~{S})-4-[[(2~{S})-4-methyl-2-(phenylmethoxycarbonylamino)pentanoyl]amino]-5-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]pentanoate

VQR, methyl (4~{S})-4-[[(2~{S})-4-methyl-2-(phenylmethoxycarbonylamino)pentanoyl]amino]-5-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]pentanoate (C24 H35 N3 O6, 461.6 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB…

Component
VQR
Formula
C24 H35 N3 O6
Class
ligand
Structures
2
PDB entries
2

Binding sites

VQR in 2 structures; the first of them:

  • 8OKB · SARS-CoV2 NSP5 in complex with a peptidomimetic ligand · VQR A401 · binds THR25, THR26, LEU27, HIS41, MET49, TYR54, PHE140, LEU141 and 12 more
  • 8S6F · A Structural Investigation of the Interaction between a GC-376-Based Peptidomimetic… · VQR A201 · binds GLU24, PHE25, HIS40, GLU71, LEU125, ASN126, LEU127, GLY128 and 12 more

Residues it binds most

HIS 2, GLY 2, LEU 2, ASN 2, GLU 2, PHE 2, THR 2, ARG 2, CYS 2, GLN 2 (residue and the binding sites it lines).

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