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Ligand · VNY

VNY · Para-biphenyl methylene C-linked mannoside

VNY, Para-biphenyl methylene C-linked mannoside (C21 H24 O5, 356.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
VNY
Formula
C21 H24 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

VNY in 2 structures; the first of them:

  • 5AAP · Complex of the FimH lectin with a C-linked para-biphenyl methylene alpha-D-mannoside · VNY A201 · binds PHE1, ILE13, ASN46, ASP47, TYR48, ILE52, ASP54, GLN133 and 4 more
  • 5AAP · Complex of the fimh lectin with a C-linked para-biphenyl methylene alpha-D-mannoside · VNY A201 · binds PHE1, ILE13, ASN46, ASP47, TYR48, ILE52, ASP54, GLN133 and 4 more

Residues it binds most

ASP 2, ASN 2, ILE 2, PHE 2, TYR 2, GLN 2 (residue and the binding sites it lines).

Found with

  • EDO · 1,2-ethanediol
  • GOL · Glycerol

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