Ligand · VNM
VNM · (2S)-2-({4-[({(6S)-2,4-diamino-5-[(1-{(2R,4S,5R)-4-hydroxy-5-[(phosphonooxy)methyl]tetrahydrofuran-2-yl}-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)methyl]-5, 6,7,8-tetrahydropyrido[3,2-d]pyrimidin-6-yl}methyl) amino]benzoyl}amino)pentanedioic acid (non-preferred name)
VNM, (2S)-2-({4-[({(6S)-2,4-diamino-5-[(1-{(2R,4S,5R)-4-hydroxy-5-[(phosphonooxy)methyl]tetrahydrofuran-2-yl}-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)methyl]-5, 6,7,8-tetrahydropyrido[3,2-d]pyrimidin-6-yl}methyl)…
- Component
- VNM
- Formula
- C30 H38 N9 O13 P
- Class
- ligand
- Structures
- 2
- PDB entries
- 1
Binding sites
VNM in 2 structures; the first of them:
- 7JXF · E. coli TSase complex with a bi-substrate reaction intermediate diastereomer analog · VNM B301 · binds ARG126, ARG21, ILE79, TRP80, TRP83, LEU143, CYS146, HIS147 and 13 more
- 7JXF · E. COLI tsase complex with a bi-substrate reaction intermediate diastereomer analog · VNM B301 · binds ARG126, ARG21, ILE79, TRP83, CYS146, GLN165, ARG166, SER167 and 10 more
Residues it binds most
ARG 2, CYS 2, HIS 2, LEU 2, TRP 2, ALA 2, ASN 2, ASP 2, GLN 2, GLY 2 (residue and the binding sites it lines).
Found with
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