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Ligand · VM2

VM2 · (1R,2S,3S,4R,5R)-4-(cyclohexylmethylamino)-5-(hydroxymethyl)cyclopentane-1,2,3-triol

VM2, (1R,2S,3S,4R,5R)-4-(cyclohexylmethylamino)-5-(hydroxymethyl)cyclopentane-1,2,3-triol (C13 H25 N O4, 259.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5…

Component
VM2
Formula
C13 H25 N O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

VM2 in 2 structures; the first of them:

  • 3ZJ6 · Crystal of Raucaffricine Glucosidase in complex with inhibitor · VM2 A1516 · binds GLN36, HIS140, TRP141, ASN185, GLU186, TRP188, THR189, HIS193 and 8 more
  • 3ZJ6 · Crystal of raucaffricine glucosidase in complex with inhibitor · VM2 A1516 · binds GLN36, HIS140, TRP141, ASN185, GLU186, TRP188, THR189, HIS193 and 8 more

Residues it binds most

TRP 4, GLU 4, ASN 4, HIS 4, GLN 4, PHE 4, THR 4, TYR 4, SER 2 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion

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