GL1X · GenesisL1 explorer

Ligand · VKJ

VKJ · 2'-deoxy-N-[(7R,8S,9R,10S)-7,8,9-trihydroxy-7,8,9,10-tetrahydrobenzo[pqr]tetraphen-10-yl]guanosine 5'-(dihydrogen phosphate)

VKJ, 2'-deoxy-N-[(7R,8S,9R,10S)-7,8,9-trihydroxy-7,8,9,10-tetrahydrobenzo[pqr]tetraphen-10-yl]guanosine 5'-(dihydrogen phosphate) (C30 H28 N5 O10 P, 649.5 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry).…

Component
VKJ
Formula
C30 H28 N5 O10 P
Class
ligand
Structures
1
PDB entries
1

Binding sites

VKJ in 1 structure; the first of them:

  • 5T14 · DNA polymerase kappa extending beyond a bulky major BENZO[A]PYRENE adduct · VKJ D6 · binds PHE171, GLU419, ARG420, THR421, LEU508, DA12, DC13, DT5 and 1 more

Residues it binds most

DT 2, ARG 2, DA 2, DC 2, GLU 2, LEU 2, PHE 2, THR 2 (residue and the binding sites it lines).

Found with

  • DZ4 · 2'-deoxy-5'-O-[(R)-hydroxy{[(r)-hydroxy(phosphonooxy) phosphoryl]amino}phosphoryl]adenosine
  • MG · Magnesium ion
  • PGE · Triethylene glycol

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.