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Ligand · VIO

VIO · N5-(1-imino-3-butenyl)-L-ornithine

VIO, N5-(1-imino-3-butenyl)-L-ornithine (C9 H20 N3 O2 +1, 202.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
VIO
Formula
C9 H20 N3 O2 +1
Class
ligand
Structures
2
PDB entries
1

Binding sites

VIO in 2 structures; the first of them:

  • 1MMW · Rat neuronal NOS heme domain with vinyl-L-NIO bound · VIO A1780 · binds GLN478, TYR562, PRO565, VAL567, PHE584, SER585, GLY586, TRP587 and 3 more
  • 1MMW · Rat neuronal nos heme domain with vinyl-L-nio bound · VIO A1780 · binds GLN478, TYR562, PRO565, VAL567, PHE584, SER585, GLY586, TRP587 and 3 more

Residues it binds most

TYR 4, ASP 4, GLN 4, GLU 4, GLY 4, PHE 4, PRO 4, SER 4, TRP 4, VAL 4 (residue and the binding sites it lines).

Found with

  • H4B · 5,6,7,8-tetrahydrobiopterin
  • HEM · Protoporphyrin IX containing Fe
  • ZN · Zinc ion
  • ACT · Acetate ion

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