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Ligand · VE8

VE8 · Non-hydrolasable alarmone analogue

VE8, Non-hydrolasable alarmone analogue (C10 H19 N6 O19 P5, 682.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
VE8
Formula
C10 H19 N6 O19 P5
Class
ligand
Structures
2
PDB entries
1

Binding sites

VE8 in 2 structures; the first of them:

  • 7OHG · Structure of Thermus thermophilus Rel bound to the non-hydrolasable alarmone analogue · VE8 A401 · binds ARG43, ARG44, SER45, TYR49, HIS52, ASP77, SER108, LYS112 and 10 more
  • 7OHG · Structure of thermus thermophilus rel bound to the non-hydrolasable alarmone analogue · VE8 A401 · binds ARG43, ARG44, SER45, TYR49, LYS112, LYS143, ASP146, ARG147 and 6 more

Residues it binds most

ARG 2, LYS 2, ASP 2, HIS 2, SER 2, ASN 2, LEU 2, MET 2, THR 2, TYR 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • MN · Manganese (II) ion
  • CL · Chloride ion
  • FMT · Formic acid
  • GOL · Glycerol

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