GL1X · GenesisL1 explorer

Ligand · VDP

VDP · (3R,5S)-5-[(2R)-2-[(1R,3aS,4E,7aR)-7a-methyl-4-[(2Z)-2-[(3S,5R)-2-methylidene-3,5-bis(oxidanyl)cyclohexylidene]ethylidene]-2,3,3a,5,6,7-hexahydro-1H-inden-1-yl]propyl]-3-methyl-3-oxidanyl-1-(4-phenylbutyl)pyrrolidin-2-one

VDP, (3R,5S)-5-[(2R)-2-[(1R,3aS,4E,7aR)-7a-methyl-4-[(2Z)-2-[(3S,5R)-2-methylidene-3,5-bis(oxidanyl)cyclohexylidene]ethylidene]-2,3,3a,5,6,7-hexahydro-1H-inden-1-yl]propyl]-3-methyl-3-oxidanyl-1-(4-phenylbutyl)pyrrolidin-2-one (C37 H53 N…

Component
VDP
Formula
C37 H53 N O4
Class
ligand
Structures
2
PDB entries
2

Binding sites

VDP in 2 structures; the first of them:

  • 5GID · Crystal structure of VDR in complex with DLAM-4 (C2 form) · VDP A501 · binds TYR143, TYR147, PHE150, PRO219, LEU220, MET222, LEU223, LEU226 and 21 more
  • 5GIE · Crystal structure of VDR in complex with DLAM-4P (P21 form) · VDP A501 · binds TYR143, TYR147, PHE150, PRO219, LEU220, LEU223, LEU226, LEU229 and 19 more

Residues it binds most

LEU 3, TYR 3, SER 3, PHE 3, VAL 3, ILE 3, ARG 3, CYS 3, HIS 3, THR 3 (residue and the binding sites it lines).

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.